MligTC455_18619 (COL6A5)
| Mlig455 TC | Mlig455 genes | Homologs | Pfam | Full annotation |
|---|---|---|---|---|
| MligTC455_18619 | Mlig455_030641 Mlig455_030999 |
COL6A5; Col4a1; Col6a4; vkg | Collagen triple helix repeat (20 copies) | Mlig455_030641: {Pfam: Collagen triple helix repeat (20 copies) [PF01391.20, score=111.9]} {Human: ENSG00000172752, COL6A5, collagen type VI alpha 5 chain, [Score=129, Expect=6e-31]} {Mouse: ENSMUSG00000032572, Col6a4, collagen, type VI, alpha 4, [Score=96.7, Expect=2e-20]; ENSMUSG00000028197, Col24a1, collagen, type XXIV, alpha 1, [Score=95.5, Expect=5e-20]} {Dmel: FBgn0000299, Col4a1, Collagen type IV alpha 1, [Score=91.3, Expect=7e-19]} {Celegans: WBGene00000708, col-135, COLlagen, [Score=99.0, Expect=1e-21]} {Smed: dd_Smed_v6_9565_0_1, dd_Smed_v6_9565_0_1, [Score=111, Expect=2e-25]} Mlig455_030999: {Pfam: Collagen triple helix repeat (20 copies) [PF01391.20, score=97.0]} {Human: ENSG00000172752, COL6A5, collagen type VI alpha 5 chain, [Score=117, Expect=9e-27]} {Mouse: ENSMUSG00000031502, Col4a1, collagen, type IV, alpha 1, [Score=95.5, Expect=5e-20]; ENSMUSG00000026390, Marco, macrophage receptor with collagenous structure, [Score=91.7, Expect=3e-19]} {Dmel: FBgn0016075, vkg, viking, [Score=83.6, Expect=2e-16]} {Celegans: WBGene00000708, col-135, COLlagen, [Score=90.9, Expect=5e-19]} {Smed: dd_Smed_v6_9565_0_1, dd_Smed_v6_9565_0_1, [Score=105, Expect=1e-23]} |
Links: Tomoseq.
Expression, Z-scaled
Variance, Z-scaled
Clusters
Expression, raw
Similar genes by expression
| Nr. | Mlig455 TC | Pearson corr. | Mlig455 genes | Homologs | Pfam | Full annotation |
|---|---|---|---|---|---|---|
| 1. | MligTC455_24515 | 0.385 | Mlig455_033346 Mlig455_033365 |
5-HT7; Drd1; HTR1B | 7 transmembrane receptor (rhodopsin family) | Details |
| 2. | MligTC455_20008 | 0.357 | Mlig455_016377 | Amiloride-sensitive sodium channel | Details | |
| 3. | MligTC455_34498 | 0.306 | Mlig455_029862 | NPLOC4; Nploc4 | NPL4 family, putative zinc binding region | Details |
| 4. | MligTC455_34499 | 0.303 | Mlig455_025160 Mlig455_063937 |
Details | ||
| 5. | MligTC455_48853 | 0.301 | Mlig455_011897 | Details |
Similar genes by variation
| Nr. | Mlig455 TC | Pearson corr. | Mlig455 genes | Homologs | Pfam | Full annotation |
|---|---|---|---|---|---|---|
| 1. | MligTC455_16807 | 0.368 | Mlig455_064067 Mlig455_064997 |
TRAF7; Traf7; ago | WD domain, G-beta repeat | Details |
| 2. | MligTC455_38653 | 0.344 | Mlig455_011000 | RPL26; RpL26; Rpl26 | Ribosomal proteins L26 eukaryotic, L24P archaeal | Details |
| 3. | MligTC455_17950 | 0.328 | Mlig455_000962 | ALDH3A1; Aldh-III; Aldh3a2 | Aldehyde dehydrogenase family | Details |
| 4. | MligTC455_35178 | 0.319 | Mlig455_030126 Mlig455_030191 |
RFX3; Rfx; Rfx3 | RFX DNA-binding domain | Details |
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