MligTC455_46724 (CHRNA3)
| Mlig455 TC | Mlig455 genes | Homologs | Pfam | Full annotation |
|---|---|---|---|---|
| MligTC455_46724 | Mlig455_066190 | CHRNA3; Chrnb2; nAChRalpha4 | Neurotransmitter-gated ion-channel transmembrane region | Mlig455_066190: {Pfam: Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=274.6]; Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=248.6]} {Human: ENSG00000080644, CHRNA3, cholinergic receptor nicotinic alpha 3 subunit, [RH, Score=432, Expect=2e-146]} {Mouse: ENSMUSG00000027950, Chrnb2, cholinergic receptor, nicotinic, beta polypeptide 2 (neuronal), [RH, Score=413, Expect=6e-139]} {Dmel: FBgn0266347, nAChRalpha4, nicotinic Acetylcholine Receptor alpha4, [Score=531, Expect=0.0]} {Celegans: WBGene00006797, unc-63, Acetylcholine receptor subunit alpha-type unc-63, [Score=465, Expect=1e-159]} {Smed: dd_Smed_v6_14630_0_1, dd_Smed_v6_14630_0_1, [RH, Score=516, Expect=1e-178]} |
Links: Tomoseq.
Expression, Z-scaled
Variance, Z-scaled
Clusters
Expression, raw
Similar genes by expression
| Nr. | Mlig455 TC | Pearson corr. | Mlig455 genes | Homologs | Pfam | Full annotation |
|---|---|---|---|---|---|---|
| 1. | MligTC455_46723 | 0.977 | Mlig455_066171 | CHRNA6; Chrna6; nAChRalpha4 | Neurotransmitter-gated ion-channel transmembrane region | Details |
| 2. | MligTC455_46722 | 0.779 | Mlig455_028319 | CHRNA3; Chrnb2; nAChRalpha4 | Neurotransmitter-gated ion-channel transmembrane region | Details |
| 3. | MligTC455_46343 | 0.366 | Mlig455_008895 Mlig455_016535 |
Details | ||
| 4. | MligTC455_44618 | 0.366 | Mlig455_030000 | Details | ||
| 5. | MligTC455_13294 | 0.338 | Mlig455_003811 | Details | ||
| 6. | MligTC455_26987 | 0.338 | Mlig455_007331 | SAP domain | Details | |
| 7. | MligTC455_12764 | 0.338 | Mlig455_048017 | Nphs1; PALLD; hbs | Immunoglobulin domain | Details |
| 8. | MligTC455_11529 | 0.338 | Mlig455_056543 | LRRN2; Lrrn2; trn | Leucine rich repeat | Details |
| 9. | MligTC455_11530 | 0.338 | Mlig455_056549 | LRRN2; Lrrn2; trn | Leucine rich repeat | Details |
| 10. | MligTC455_18419 | 0.338 | Mlig455_058908 | KP78a; SIK2; Sik2 | Protein kinase domain | Details |
| 11. | MligTC455_19306 | 0.338 | Mlig455_059347 | Details | ||
| 12. | MligTC455_32501 | 0.333 | Mlig455_053552 | GRIA1; GluRIA; Gria1 | Ligand-gated ion channel | Details |
| 13. | MligTC455_21156 | 0.323 | Mlig455_030988 | Details | ||
| 14. | MligTC455_17736 | 0.32 | Mlig455_005001 | PKNOX2; Pknox2; hth | Homeobox KN domain | Details (TF) |
Similar genes by variation
| Nr. | Mlig455 TC | Pearson corr. | Mlig455 genes | Homologs | Pfam | Full annotation |
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