M. lignano Single Cells Juveniles
Mlig455
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MligTC455_24598 (RTL1)

Mlig455 TC Mlig455 genes Homologs Pfam Full annotation
MligTC455_24598 Mlig455_031589
Mlig455_061283
Mlig455_064050
Mlig455_064051
Mlig455_064305
Mlig455_065305		 RTL1; Rtl1 RNase H-like domain found in reverse transcriptase;
Reverse transcriptase (RNA-dependent DNA polymerase)		 Mlig455_031589:
{Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=104.0]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=103.6]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=93.5]; gag-polyprotein putative aspartyl protease [PF13975.8, score=32.7]; Aspartyl protease [PF09668.12, score=26.5]; Aspartyl protease [PF13650.8, score=26.3]; 'Cold-shock' DNA-binding domain [PF00313.24, score=22.7]; Zinc knuckle [PF00098.25, score=22.2]; Protein of unknown function (DUF1759) [PF03564.17, score=19.5]}
{Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=99.8, Expect=2e-20]}
{Mouse: ENSMUSG00000085925, Rtl1, retrotransposon Gaglike 1, [Score=84.0, Expect=1e-15]; ENSMUSG00000098639, Rtl1, retrotransposon Gaglike 1, [Score=84.0, Expect=1e-15]}
{Smed: dd_Smed_v6_1574_6_43, dd_Smed_v6_1574_6_43, [Score=296, Expect=8e-88]}

Mlig455_061283:
{Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=104.0]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=103.6]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=93.5]; gag-polyprotein putative aspartyl protease [PF13975.8, score=32.7]; Aspartyl protease [PF09668.12, score=26.5]; Aspartyl protease [PF13650.8, score=26.3]; 'Cold-shock' DNA-binding domain [PF00313.24, score=22.7]; Zinc knuckle [PF00098.25, score=22.2]; Protein of unknown function (DUF1759) [PF03564.17, score=19.5]}
{Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=99.8, Expect=2e-20]}
{Mouse: ENSMUSG00000085925, Rtl1, retrotransposon Gaglike 1, [Score=84.0, Expect=1e-15]; ENSMUSG00000098639, Rtl1, retrotransposon Gaglike 1, [Score=84.0, Expect=1e-15]}
{Smed: dd_Smed_v6_1574_6_43, dd_Smed_v6_1574_6_43, [Score=296, Expect=8e-88]}

Mlig455_064050:
{Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=104.3]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=95.3]}
{Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=54.3, Expect=4e-08]}
{Mouse: ENSMUSG00000085925, Rtl1, retrotransposon Gaglike 1, [Score=53.9, Expect=3e-08]; ENSMUSG00000098639, Rtl1, retrotransposon Gaglike 1, [Score=53.9, Expect=3e-08]}
{Smed: dd_Smed_v6_15498_0_18, dd_Smed_v6_15498_0_18, [Score=126, Expect=4e-35]}

Mlig455_064051:
{Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=72.4]}
{Smed: dd_Smed_v6_1574_6_43, dd_Smed_v6_1574_6_43, [Score=113, Expect=3e-30]}

Mlig455_064305:
{Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=94.3]}
{Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=144, Expect=3e-40]}

Mlig455_065305:
{Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=72.9]}
{Smed: dd_Smed_v6_1574_6_43, dd_Smed_v6_1574_6_43, [Score=144, Expect=5e-41]}

Links: Tomoseq.

Expression, Z-scaled

Variance, Z-scaled

Clusters

Expression, raw

Similar genes by expression

Nr. Mlig455 TC Pearson corr. Mlig455 genes Homologs Pfam Full annotation
1. MligTC455_10494 0.624 Mlig455_004089 Details
2. MligTC455_24587 0.589 Mlig455_014786 RTL1; Rtl1 Reverse transcriptase (RNA-dependent DNA polymerase) Details
3. MligTC455_22849 0.589 Mlig455_031095 Details
4. MligTC455_06779 0.589 Mlig455_065263 Details
5. MligTC455_24597 0.589 Mlig455_065304 RNase H-like domain found in reverse transcriptase Details
6. MligTC455_23992 0.589 Mlig455_068178 Details
7. MligTC455_10493 0.507 Mlig455_004006
Mlig455_004088		 Details
8. MligTC455_24590 0.507 Mlig455_022448 Details
9. MligTC455_21194 0.496 Mlig455_032486 TUBB; Tubb5; betaTub85D Tubulin/FtsZ family, GTPase domain Details
10. MligTC455_40756 0.496 Mlig455_050356
Mlig455_065112		 Details
11. MligTC455_41442 0.466 Mlig455_033938 Details
12. MligTC455_14570 0.466 Mlig455_042703 Details
13. MligTC455_03846 0.466 Mlig455_051163 Details
14. MligTC455_53563 0.466 Mlig455_054425 Ndae1; SLC4A11; Slc4a11 HCO3- transporter family Details
15. MligTC455_19535 0.466 Mlig455_057505 Details
16. MligTC455_55155 0.466 Mlig455_065600 7 transmembrane receptor (rhodopsin family) Details
17. MligTC455_26944 0.438 Mlig455_016975
Mlig455_021518		 ANK1; Ank1; CG3104 Ankyrin repeats (3 copies) Details
18. MligTC455_46897 0.426 Mlig455_011469
Mlig455_011555
Mlig455_051070		 FKRP; Fkrp LicD family Details
19. MligTC455_57676 0.414 Mlig455_003458 Details
20. MligTC455_48422 0.414 Mlig455_007852 ANK2; Ank2; CG3104 Ankyrin repeats (3 copies) Details
21. MligTC455_10273 0.414 Mlig455_010226 PH domain Details
22. MligTC455_13451 0.414 Mlig455_019647 Details
23. MligTC455_06430 0.414 Mlig455_024470 Details
24. MligTC455_34381 0.414 Mlig455_043705
Mlig455_067910		 SAP domain Details
25. MligTC455_33911 0.414 Mlig455_054038 Details
26. MligTC455_01188 0.414 Mlig455_058138 Details
27. MligTC455_47876 0.414 Mlig455_068048 Amiloride-sensitive sodium channel Details
28. MligTC455_45351 0.412 Mlig455_031191 Srg family chemoreceptor Details
29. MligTC455_54291 0.384 Mlig455_050973
Mlig455_051029		 Tetratricopeptide repeat Details
30. MligTC455_23535 0.377 Mlig455_037718 Details
31. MligTC455_31536 0.377 Mlig455_008491
Mlig455_060305		 SAP domain Details
32. MligTC455_26943 0.372 Mlig455_016974
Mlig455_021256		 ANKRD29; Ankrd29; CG3104 Ankyrin repeats (3 copies) Details
33. MligTC455_23498 0.341 Mlig455_012863 Gm973; KIAA2012 Domain of unknown function (DUF4670) Details
34. MligTC455_47871 0.336 Mlig455_006068 Amiloride-sensitive sodium channel Details
35. MligTC455_10272 0.336 Mlig455_010160 Details
36. MligTC455_12374 0.336 Mlig455_041114 Details
37. MligTC455_22974 0.336 Mlig455_042585 Details
38. MligTC455_32664 0.328 Mlig455_015116
Mlig455_044224
Mlig455_044242
Mlig455_054085
Mlig455_061909
Mlig455_068039		 HNRNPUL1 SAP domain Details
39. MligTC455_56989 0.327 Mlig455_005396 Details
40. MligTC455_25554 0.327 Mlig455_025993 7 transmembrane receptor (rhodopsin family) Details
41. MligTC455_06284 0.327 Mlig455_033967 Calm1; Cam; NOX5 EF hand Details
42. MligTC455_00013 0.311 Mlig455_024354 Details
43. MligTC455_03256 0.311 Mlig455_015207
Mlig455_015211
Mlig455_027170		 C1GALT1; C1GalTA; C1galt1 Fringe-like Details
44. MligTC455_37127 0.311 Mlig455_044059 Details

Similar genes by variation

Nr. Mlig455 TC Pearson corr. Mlig455 genes Homologs Pfam Full annotation
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