M. lignano Single Cells Juveniles
Mlig455
transcriptome Search Clusters Lineages Gates Plates Cells Download

MligTC455_51185 (GEFmeso)

Mlig455 TC Mlig455 genes Homologs Pfam Full annotation
MligTC455_51185 Mlig455_031371
Mlig455_056513		 GEFmeso; PLEKHG1; Plekhg3 RhoGEF domain Mlig455_031371:
{TRANSSPLICED}
{Pfam: RhoGEF domain [PF00621.22, score=136.8]}
{Human: ENSG00000120278, PLEKHG1, pleckstrin homology and RhoGEF domain containing G1, [RH, Score=241, Expect=6e-64]; ENSG00000126822, PLEKHG3, pleckstrin homology and RhoGEF domain containing G3, [RH, Score=237, Expect=4e-63]}
{Mouse: ENSMUSG00000052609, Plekhg3, pleckstrin homology domain containing, family G (with RhoGef domain) member 3, [RH, Score=239, Expect=8e-64]}
{Dmel: FBgn0050115, GEFmeso, Guanine nucleotide exchange factor in mesoderm, [RH, Score=201, Expect=6e-52]}
{Celegans: WBGene00009337, uig-1, UNC-112-Interacting Guanine nucleotide exchange factor, [RH, Score=191, Expect=3e-49]}
{Smed: dd_Smed_v6_4803_0_1, dd_Smed_v6_4803_0_1, [RH, Score=186, Expect=1e-48]}

Mlig455_056513:
{TRANSSPLICED}
{Pfam: RhoGEF domain [PF00621.22, score=135.4]}
{Human: ENSG00000120278, PLEKHG1, pleckstrin homology and RhoGEF domain containing G1, [RH, Score=234, Expect=6e-62]; ENSG00000126822, PLEKHG3, pleckstrin homology and RhoGEF domain containing G3, [RH, Score=232, Expect=2e-61]}
{Mouse: ENSMUSG00000052609, Plekhg3, pleckstrin homology domain containing, family G (with RhoGef domain) member 3, [RH, Score=233, Expect=6e-62]}
{Dmel: FBgn0050115, GEFmeso, Guanine nucleotide exchange factor in mesoderm, [RH, Score=200, Expect=1e-51]}
{Celegans: WBGene00009337, uig-1, UNC-112-Interacting Guanine nucleotide exchange factor, [RH, Score=187, Expect=2e-48]}
{Smed: dd_Smed_v6_4803_0_1, dd_Smed_v6_4803_0_1, [RH, Score=180, Expect=1e-46]}

Links: Tomoseq.

Expression, Z-scaled

Variance, Z-scaled

Clusters

Expression, raw

Similar genes by expression

Nr. Mlig455 TC Pearson corr. Mlig455 genes Homologs Pfam Full annotation
1. MligTC455_23462 0.342 Mlig455_013851 LBR; Lbr Ergosterol biosynthesis ERG4/ERG24 family Details
2. MligTC455_28166 0.337 Mlig455_003593 DDX60; Ddx60; tst DEAD/DEAH box helicase Details
3. MligTC455_53526 0.324 Mlig455_054218 PURA; Pur-alpha; Pura PurA ssDNA and RNA-binding protein Details (TF)
4. MligTC455_23382 0.32 Mlig455_043120 Nup153; RANBP2 Zn-finger in Ran binding protein and others Details
5. MligTC455_23463 0.318 Mlig455_059943 LBR; Lbr Ergosterol biosynthesis ERG4/ERG24 family Details
6. MligTC455_53527 0.317 Mlig455_060765 PURA; Pur-alpha; Pura PurA ssDNA and RNA-binding protein Details (TF)
7. MligTC455_53525 0.316 Mlig455_032214 PURA; Pur-alpha; Pura PurA ssDNA and RNA-binding protein Details (TF)
8. MligTC455_48501 0.314 Mlig455_064884 GDI2; Gdi; Gdi2 GDP dissociation inhibitor Details
9. MligTC455_28141 0.313 Mlig455_011472
Mlig455_069148		 Details
10. MligTC455_28137 0.307 Mlig455_023496 Domain of unknown function (DUF4218) Details
11. MligTC455_23381 0.305 Mlig455_026138 Nup153; RANBP2 Zn-finger in Ran binding protein and others Details
12. MligTC455_28138 0.304 Mlig455_022674
Mlig455_032517		 Details
13. MligTC455_34521 0.304 Mlig455_046086 ANKLE2; Ankle2 Ankyrin repeats (many copies) Details
14. MligTC455_14285 0.303 Mlig455_016582 NCL; Tra2b RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Details
15. MligTC455_41372 0.302 Mlig455_040212 CG3689; NUDT21; Nudt21 Nucleotide hydrolase Details
16. MligTC455_45079 0.302 Mlig455_037477
Mlig455_044495		 CG32103; SLC25A24; SLC25A25; Slc25a25 Mitochondrial carrier protein Details
17. MligTC455_10882 0.302 Mlig455_019677
Mlig455_048100		 ACACA; ACC; Acaca Acetyl-CoA carboxylase, central region Details

Similar genes by variation

Nr. Mlig455 TC Pearson corr. Mlig455 genes Homologs Pfam Full annotation
1. MligTC455_24564 0.429 Mlig455_029271
Mlig455_035654		 CG17765; PEF1; Pef1 EF hand Details
2. MligTC455_43153 0.397 Mlig455_024507 Ip259; NSA2; Nsa2 Ribosomal protein S8e Details
3. MligTC455_43152 0.392 Mlig455_024394 Ip259; NSA2; Nsa2 Ribosomal protein S8e Details
4. MligTC455_35964 0.355 Mlig455_024252 Neuropeptide S precursor protein Details
5. MligTC455_24183 0.347 Mlig455_023934 Dsp1; HMGB1; Hmgb1 HMG (high mobility group) box Details
6. MligTC455_31252 0.346 Mlig455_016030
Mlig455_054951
Mlig455_054965		 Rough deal protein C-terminal region Details
7. MligTC455_49729 0.321 Mlig455_066830 Universal stress protein family Details
Berezikov Lab - 2023 © ERIBA