M. lignano Single Cells Juveniles
Mlig455
transcriptome Search Clusters Lineages Gates Plates Cells Download

MligTC455_21913 (NOVA1)

Mlig455 TC Mlig455 genes Homologs Pfam Full annotation
MligTC455_21913 Mlig455_041262
Mlig455_053075		 NOVA1; Nova1; ps KH domain Mlig455_041262:
{Pfam: KH domain [PF00013.31, score=141.0]; KH domain [PF07650.19, score=44.2]; KH domain [PF13083.8, score=20.9]; KH-like RNA-binding domain [PF16005.7, score=19.9]}
{Human: ENSG00000139910, NOVA1, NOVA alternative splicing regulator 1, [RH, Score=237, Expect=2e-71]}
{Mouse: ENSMUSG00000021047, Nova1, neuro-oncological ventral antigen 1, [RH, Score=224, Expect=3e-66]}
{Dmel: FBgn0261552, ps, pasilla, [RH, Score=290, Expect=5e-91]}
{Celegans: WBGene00013347, nova-1, NOVA kh (KH) homology domain homolog, [RH, Score=133, Expect=5e-34]}
{Smed: dd_Smed_v6_5632_0_1, dd_Smed_v6_5632_0_1, [RH, Score=317, Expect=1e-100]}

Mlig455_053075:
{Pfam: KH domain [PF00013.31, score=138.8]; KH domain [PF07650.19, score=44.2]; KH domain [PF13083.8, score=20.6]; KH-like RNA-binding domain [PF16005.7, score=20.0]}
{Human: ENSG00000139910, NOVA1, NOVA alternative splicing regulator 1, [RH, Score=236, Expect=2e-71]}
{Mouse: ENSMUSG00000021047, Nova1, neuro-oncological ventral antigen 1, [RH, Score=223, Expect=3e-66]}
{Dmel: FBgn0261552, ps, pasilla, [RH, Score=284, Expect=8e-89]}
{Celegans: WBGene00013347, nova-1, NOVA kh (KH) homology domain homolog, [RH, Score=133, Expect=4e-34]}
{Smed: dd_Smed_v6_5632_0_1, dd_Smed_v6_5632_0_1, [Score=315, Expect=4e-100]}

Links: Tomoseq.

Expression, Z-scaled

Variance, Z-scaled

Clusters

Expression, raw

Similar genes by expression

Nr. Mlig455 TC Pearson corr. Mlig455 genes Homologs Pfam Full annotation
1. MligTC455_21912 0.857 Mlig455_036875 NOVA1; Nova1; ps KH domain Details

Similar genes by variation

Nr. Mlig455 TC Pearson corr. Mlig455 genes Homologs Pfam Full annotation
1. MligTC455_33210 0.561 Mlig455_061465
Mlig455_061476		 NFYA; Nf-YA; Nfya CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B Details
2. MligTC455_23442 0.452 Mlig455_001500
Mlig455_001518		 AC007325.2; PRODH; Prodh; slgA Proline dehydrogenase Details
3. MligTC455_47072 0.445 Mlig455_040986
Mlig455_056402		 CG34132; TIMM13; Timm13 Tim10/DDP family zinc finger Details
4. MligTC455_34937 0.436 Mlig455_037759 SNRPD1; SmD1; Snrpd1 LSM domain Details
5. MligTC455_25319 0.425 Mlig455_032116
Mlig455_043339		 CG10185; NWD2; Nwd2; RAB11B; Rab11; Rab11b AAA domain;
Ras family		 Details
6. MligTC455_17450 0.424 Mlig455_000651 ATP6AP1; Atp6ap1; VhaAC45 Vacuolar ATP synthase subunit S1 (ATP6S1) Details
7. MligTC455_44980 0.405 Mlig455_059798 RHBDL2; Rhbdl2; rho-4 Rhomboid family Details
8. MligTC455_28851 0.401 Mlig455_015966
Mlig455_015985
Mlig455_016082
Mlig455_041037
Mlig455_051413
Mlig455_059417		 Details
9. MligTC455_34463 0.39 Mlig455_058167
Mlig455_058218		 CELF5; Celf4; bru3 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Details
10. MligTC455_34306 0.369 Mlig455_026995 H3F3B; H3f3a; His3.3B Core histone H2A/H2B/H3/H4 Details
11. MligTC455_34307 0.368 Mlig455_043471 H3F3A; H3f3a; His3.3B Core histone H2A/H2B/H3/H4 Details
12. MligTC455_19173 0.365 Mlig455_042556 pck PMP-22/EMP/MP20/Claudin tight junction Details
13. MligTC455_01789 0.357 Mlig455_058713 Details
14. MligTC455_28672 0.35 Mlig455_070308 CAPRIN1; Capr; Caprin1 Caprin-1 dimerization domain Details
15. MligTC455_28671 0.349 Mlig455_059758 CAPRIN1; Capr; Caprin1 Caprin-1 dimerization domain Details
16. MligTC455_50884 0.339 Mlig455_058834 HDAC1; HDAC2; Hdac2 Histone deacetylase domain Details
17. MligTC455_34875 0.336 Mlig455_065248 CG42675; ZC2HC1A; Zc2hc1a zinc-finger of a C2HC-type Details
18. MligTC455_46280 0.336 Mlig455_070151 CDIP1; CG32280; Litaf LITAF-like zinc ribbon domain Details
19. MligTC455_46982 0.331 Mlig455_044826 SYN3; Syn; Syn3 Synapsin, ATP binding domain Details
20. MligTC455_48522 0.33 Mlig455_032491 nrv1 Sodium / potassium ATPase beta chain Details
21. MligTC455_25528 0.326 Mlig455_053369 ATP5F1B; ATPsynbeta; Atp5b ATP synthase alpha/beta family, nucleotide-binding domain Details
22. MligTC455_21444 0.317 Mlig455_038339
Mlig455_038365
Mlig455_068285		 RAN; Ran Ras family Details
23. MligTC455_19798 0.314 Mlig455_054303 B9D1; B9d1 Ciliary basal body-associated, B9 protein Details
24. MligTC455_28670 0.314 Mlig455_059746 CAPRIN1; Capr; Caprin1 Caprin-1 dimerization domain Details
25. MligTC455_28293 0.312 Mlig455_005203 Details
26. MligTC455_43050 0.31 Mlig455_020082 CD63; Tsp42Ed; Tspan6 Tetraspanin family Details
27. MligTC455_43524 0.309 Mlig455_031179 SLC30A2; Slc30a2; ZnT35C Cation efflux family Details
Berezikov Lab - 2023 © ERIBA