M. lignano Single Cells Juveniles
Mlig455
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MligTC455_27883 (AMPKalpha)

Mlig455 TC Mlig455 genes Homologs Pfam Full annotation
MligTC455_27883 Mlig455_001736
Mlig455_007699
Mlig455_038519
Mlig455_052230		 AMPKalpha; PRKAA2; Prkaa2; RTL1 Integrase core domain;
Protein kinase domain;
Reverse transcriptase (RNA-dependent DNA polymerase)		 Mlig455_001736:
{Pfam: Integrase core domain [PF00665.28, score=50.1]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=34.7]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=26.3]; Integrase core domain [PF13683.8, score=23.7]; Aspartyl protease [PF13650.8, score=20.1]; gag-polyprotein putative aspartyl protease [PF13975.8, score=19.1]}
{Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=68.6, Expect=3e-11]}
{Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=94.7, Expect=5e-20]}

Mlig455_007699:
{Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=61.1]; Integrase core domain [PF00665.28, score=49.1]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=27.0]; Integrase core domain [PF13683.8, score=23.5]; Aspartyl protease [PF13650.8, score=20.0]}
{Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=72.0, Expect=2e-12]}
{Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=159, Expect=9e-41]}

Mlig455_038519:
{Pfam: Protein kinase domain [PF00069.27, score=262.3]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=153.1]; Adenylate sensor of SNF1-like protein kinase [PF16579.7, score=43.0]; Kinase-like [PF14531.8, score=23.9]; Phosphotransferase enzyme family [PF01636.25, score=18.9]}
{Human: ENSG00000162409, PRKAA2, protein kinase AMP-activated catalytic subunit alpha 2, [Score=500, Expect=2e-171]}
{Mouse: ENSMUSG00000028518, Prkaa2, protein kinase, AMP-activated, alpha 2 catalytic subunit, [Score=493, Expect=9e-169]; ENSMUSG00000050697, Prkaa1, protein kinase, AMP-activated, alpha 1 catalytic subunit, [Score=472, Expect=8e-161]}
{Dmel: FBgn0023169, AMPKalpha, AMP-activated protein kinase alpha subunit, [Score=536, Expect=0.0]}
{Celegans: WBGene00020142, aak-2, 5'-AMP-activated protein kinase catalytic subunit alpha-2, [Score=506, Expect=4e-174]}
{Smed: dd_Smed_v6_2538_0_1, dd_Smed_v6_2538_0_1, [Score=544, Expect=0.0]}

Mlig455_052230:
{Pfam: Protein kinase domain [PF00069.27, score=260.0]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=150.7]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=99.4]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=97.0]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=60.4]; Integrase zinc binding domain [PF17921.3, score=53.3]; Integrase core domain [PF00665.28, score=48.9]; Adenylate sensor of SNF1-like protein kinase [PF16579.7, score=40.6]; Zinc knuckle [PF00098.25, score=23.2]; Integrase core domain [PF13683.8, score=22.7]; Kinase-like [PF14531.8, score=21.3]}
{Human: ENSG00000162409, PRKAA2, protein kinase AMP-activated catalytic subunit alpha 2, [Score=416, Expect=4e-129]; ENSG00000132356, PRKAA1, protein kinase AMP-activated catalytic subunit alpha 1, [Score=404, Expect=1e-124]}
{Mouse: ENSMUSG00000028518, Prkaa2, protein kinase, AMP-activated, alpha 2 catalytic subunit, [Score=419, Expect=4e-130]; ENSMUSG00000050697, Prkaa1, protein kinase, AMP-activated, alpha 1 catalytic subunit, [Score=402, Expect=2e-124]}
{Dmel: FBgn0023169, AMPKalpha, AMP-activated protein kinase alpha subunit, [Score=431, Expect=3e-134]}
{Celegans: WBGene00020142, aak-2, 5'-AMP-activated protein kinase catalytic subunit alpha-2, [Score=425, Expect=2e-132]}
{Smed: dd_Smed_v6_2538_0_1, dd_Smed_v6_2538_0_1, [Score=446, Expect=3e-140]}

Links: Tomoseq.

Expression, Z-scaled

Variance, Z-scaled

Clusters

Expression, raw

Similar genes by expression

Nr. Mlig455 TC Pearson corr. Mlig455 genes Homologs Pfam Full annotation
1. MligTC455_27882 0.7 Mlig455_037128 AMPKalpha; PRKAA2; Prkaa2 Protein kinase domain Details
2. MligTC455_06029 0.326 Mlig455_044732 Details
3. MligTC455_22092 0.319 Mlig455_011789
Mlig455_062348		 PRR9 Details
4. MligTC455_31826 0.318 Mlig455_047238 CG5830; CTDSP1; Ctdsp1 NLI interacting factor-like phosphatase Details
5. MligTC455_43591 0.317 Mlig455_035269 CG6000 Rhodanese-like domain Details
6. MligTC455_25450 0.309 Mlig455_016972 Details

Similar genes by variation

Nr. Mlig455 TC Pearson corr. Mlig455 genes Homologs Pfam Full annotation
1. MligTC455_43846 0.404 Mlig455_054802 PSMC4; Psmc4; Rpt3 ATPase family associated with various cellular activities (AAA) Details
2. MligTC455_37791 0.398 Mlig455_058329
Mlig455_063055		 MEF2C; Mef2; Mef2c PLAT/LH2 domain;
SRF-type transcription factor (DNA-binding and dimerisation domain)		 Details
3. MligTC455_37790 0.364 Mlig455_009683 MEF2C; Mef2; Mef2c SRF-type transcription factor (DNA-binding and dimerisation domain) Details
4. MligTC455_09344 0.322 Mlig455_021905
Mlig455_021988
Mlig455_022038		 Details
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