M. lignano Single Cells Juveniles
Mlig455
transcriptome Search Clusters Lineages Gates Plates Cells Download

MligTC455_18238 (PCGF1)

Mlig455 TC Mlig455 genes Homologs Pfam Full annotation
MligTC455_18238 Mlig455_017178
Mlig455_048127		 PCGF1; Pcgf1; l(3)73Ah Zinc finger, C3HC4 type (RING finger) Mlig455_017178:
{TRANSSPLICED}
{Pfam: Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=31.7]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=30.3]; zinc-RING finger domain [PF14634.8, score=20.7]; Ring finger domain [PF13639.8, score=19.8]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=18.7]}
{Human: ENSG00000115289, PCGF1, polycomb group ring finger 1, [Score=94.4, Expect=5e-23]; ENSG00000278644, PCGF2, polycomb group ring finger 2, [Score=92.4, Expect=9e-22]; ENSG00000277258, PCGF2, polycomb group ring finger 2, [Score=92.4, Expect=9e-22]; ENSG00000269897, COMMD3-BMI1, COMMD3-BMI1 readthrough, [Score=90.5, Expect=1e-20]; ENSG00000168283, BMI1, BMI1 proto-oncogene, polycomb ring finger, [Score=90.1, Expect=5e-21]}
{Mouse: ENSMUSG00000069678, Pcgf1, polycomb group ring finger 1, [Score=94.4, Expect=3e-23]; ENSMUSG00000018537, Pcgf2, polycomb group ring finger 2, [Score=92.0, Expect=9e-22]; ENSMUSG00000026739, Bmi1, Bmi1 polycomb ring finger oncogene, [Score=90.1, Expect=3e-21]}
{Dmel: FBgn0002283, l(3)73Ah, lethal (3) 73Ah, [Score=81.6, Expect=8e-19]}
{Celegans: WBGene00008684, mig-32, [Score=67.8, Expect=3e-13]}
{Smed: dd_Smed_v6_3477_0_1, dd_Smed_v6_3477_0_1, [Score=87.8, Expect=2e-21]}

Mlig455_048127:
{TRANSSPLICED}
{Pfam: Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=31.7]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=30.3]; zinc-RING finger domain [PF14634.8, score=20.7]; Ring finger domain [PF13639.8, score=19.8]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=18.7]}
{Human: ENSG00000115289, PCGF1, polycomb group ring finger 1, [Score=94.4, Expect=5e-23]; ENSG00000278644, PCGF2, polycomb group ring finger 2, [Score=92.4, Expect=9e-22]; ENSG00000277258, PCGF2, polycomb group ring finger 2, [Score=92.4, Expect=9e-22]; ENSG00000269897, COMMD3-BMI1, COMMD3-BMI1 readthrough, [Score=90.5, Expect=1e-20]; ENSG00000168283, BMI1, BMI1 proto-oncogene, polycomb ring finger, [Score=90.1, Expect=5e-21]}
{Mouse: ENSMUSG00000069678, Pcgf1, polycomb group ring finger 1, [Score=94.4, Expect=3e-23]; ENSMUSG00000018537, Pcgf2, polycomb group ring finger 2, [Score=92.0, Expect=9e-22]; ENSMUSG00000026739, Bmi1, Bmi1 polycomb ring finger oncogene, [Score=90.1, Expect=3e-21]}
{Dmel: FBgn0002283, l(3)73Ah, lethal (3) 73Ah, [Score=81.6, Expect=8e-19]}
{Celegans: WBGene00008684, mig-32, [Score=67.8, Expect=3e-13]}
{Smed: dd_Smed_v6_3477_0_1, dd_Smed_v6_3477_0_1, [Score=87.8, Expect=2e-21]}

Links: Tomoseq.

Expression, Z-scaled

Variance, Z-scaled

Clusters

Expression, raw

Similar genes by expression

Nr. Mlig455 TC Pearson corr. Mlig455 genes Homologs Pfam Full annotation
1. MligTC455_27867 0.405 Mlig455_040663 RTL1 RNase H-like domain found in reverse transcriptase Details
2. MligTC455_55716 0.376 Mlig455_014305 PRR9 Details
3. MligTC455_11621 0.362 Mlig455_034355
Mlig455_034463		 CG13126; METTL17; Mettl17 Mitochondrial small ribosomal subunit Rsm22 Details
4. MligTC455_40071 0.346 Mlig455_010982 ATXN1L; Atx-1; Atxn1l Ataxin-1 and HBP1 module (AXH) Details
5. MligTC455_02100 0.339 Mlig455_041017 Cyp1; PPIF; Ppif Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Details
6. MligTC455_23918 0.334 Mlig455_030499 Methyltransferase domain Details
7. MligTC455_11620 0.332 Mlig455_034419 CG13126; METTL17; Mettl17 Mitochondrial small ribosomal subunit Rsm22 Details
8. MligTC455_14807 0.316 Mlig455_003714 Details
9. MligTC455_22458 0.316 Mlig455_004517
Mlig455_064242		 CG7927; TCF25; Tcf25 Transcriptional repressor TCF25 Details
10. MligTC455_39181 0.311 Mlig455_061266 NCAPH; Ncaph; barr Condensin complex subunit 2 Details
11. MligTC455_21638 0.31 Mlig455_026393 CG5549; SLC6A5; Slc6a5 Sodium:neurotransmitter symporter family Details
12. MligTC455_52580 0.308 Mlig455_034237 CAPN11; CalpA; Capn2 Calpain family cysteine protease Details
13. MligTC455_17566 0.307 Mlig455_054331 Details
14. MligTC455_22457 0.307 Mlig455_060278 CG7927; TCF25; Tcf25 Transcriptional repressor TCF25 Details
15. MligTC455_23336 0.306 Mlig455_007789 PLAC8 family Details
16. MligTC455_44669 0.302 Mlig455_013330 Growth-arrest specific micro-tubule binding Details
17. MligTC455_44670 0.302 Mlig455_013337 Growth-arrest specific micro-tubule binding Details
18. MligTC455_41184 0.302 Mlig455_027548 NR2E1; Nr2e1; tll Zinc finger, C4 type (two domains) Details (TF)

Similar genes by variation

Nr. Mlig455 TC Pearson corr. Mlig455 genes Homologs Pfam Full annotation
Berezikov Lab - 2023 © ERIBA