M. lignano Single Cells Juveniles
Mlig455
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MligTC455_07511 (GRIA1)

Mlig455 TC Mlig455 genes Homologs Pfam Full annotation
MligTC455_07511 Mlig455_040827
Mlig455_040924		 GRIA1; GluRIB; Gria1 Ligand-gated ion channel Mlig455_040827:
{Pfam: Ligand-gated ion channel [PF00060.28, score=194.2]; Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=124.4]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=94.8]; Receptor family ligand binding region [PF01094.30, score=87.8]}
{Human: ENSG00000155511, GRIA1, glutamate ionotropic receptor AMPA type subunit 1, [RH, Score=598, Expect=0.0]; ENSG00000152578, GRIA4, glutamate ionotropic receptor AMPA type subunit 4, [RH, Score=591, Expect=0.0]; ENSG00000120251, GRIA2, glutamate ionotropic receptor AMPA type subunit 2, [RH, Score=587, Expect=0.0]; ENSG00000125675, GRIA3, glutamate ionotropic receptor AMPA type subunit 3, [RH, Score=572, Expect=0.0]}
{Mouse: ENSMUSG00000020524, Gria1, glutamate receptor, ionotropic, AMPA1 (alpha 1), [RH, Score=599, Expect=0.0]; ENSMUSG00000025892, Gria4, glutamate receptor, ionotropic, AMPA4 (alpha 4), [RH, Score=592, Expect=0.0]; ENSMUSG00000033981, Gria2, glutamate receptor, ionotropic, AMPA2 (alpha 2), [RH, Score=585, Expect=0.0]}
{Dmel: FBgn0264000, GluRIB, Glutamate receptor IB, [RH, Score=520, Expect=2e-165]}
{Celegans: WBGene00001612, glr-1, Glutamate receptor 1, [RH, Score=489, Expect=4e-156]}
{Smed: dd_Smed_v6_7562_0_1, dd_Smed_v6_7562_0_1, [Score=698, Expect=0.0]}

Mlig455_040924:
{Pfam: Ligand-gated ion channel [PF00060.28, score=194.4]; Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=124.6]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=95.0]; Receptor family ligand binding region [PF01094.30, score=91.7]}
{Human: ENSG00000155511, GRIA1, glutamate ionotropic receptor AMPA type subunit 1, [RH, Score=601, Expect=0.0]; ENSG00000152578, GRIA4, glutamate ionotropic receptor AMPA type subunit 4, [RH, Score=592, Expect=0.0]; ENSG00000120251, GRIA2, glutamate ionotropic receptor AMPA type subunit 2, [RH, Score=588, Expect=0.0]; ENSG00000125675, GRIA3, glutamate ionotropic receptor AMPA type subunit 3, [RH, Score=574, Expect=0.0]}
{Mouse: ENSMUSG00000020524, Gria1, glutamate receptor, ionotropic, AMPA1 (alpha 1), [RH, Score=602, Expect=0.0]; ENSMUSG00000025892, Gria4, glutamate receptor, ionotropic, AMPA4 (alpha 4), [RH, Score=593, Expect=0.0]; ENSMUSG00000033981, Gria2, glutamate receptor, ionotropic, AMPA2 (alpha 2), [RH, Score=586, Expect=0.0]}
{Dmel: FBgn0264000, GluRIB, Glutamate receptor IB, [RH, Score=518, Expect=2e-165]}
{Celegans: WBGene00001612, glr-1, Glutamate receptor 1, [RH, Score=488, Expect=1e-156]}
{Smed: dd_Smed_v6_7562_0_1, dd_Smed_v6_7562_0_1, [RH, Score=705, Expect=0.0]}

Links: Tomoseq.

Expression, Z-scaled

Variance, Z-scaled

Clusters

Expression, raw

Similar genes by expression

Nr. Mlig455 TC Pearson corr. Mlig455 genes Homologs Pfam Full annotation
1. MligTC455_07512 0.692 Mlig455_049171 CG3822; GRIA1; Gria1 Ligated ion channel L-glutamate- and glycine-binding site Details
2. MligTC455_10096 0.645 Mlig455_020713 Details
3. MligTC455_14532 0.645 Mlig455_026251 Details
4. MligTC455_41928 0.645 Mlig455_032338 Details
5. MligTC455_00428 0.645 Mlig455_043303 Details
6. MligTC455_18010 0.645 Mlig455_062575 Details
7. MligTC455_05637 0.532 Mlig455_046005 Details
8. MligTC455_47068 0.455 Mlig455_060910 Details
9. MligTC455_47069 0.455 Mlig455_060973 Details
10. MligTC455_03822 0.406 Mlig455_009908 Details
11. MligTC455_04682 0.406 Mlig455_014935 Details
12. MligTC455_21942 0.406 Mlig455_040670 Details
13. MligTC455_33572 0.406 Mlig455_054175 RNase H-like domain found in reverse transcriptase Details
14. MligTC455_25013 0.406 Mlig455_065968 Receptor family ligand binding region Details
15. MligTC455_24999 0.372 Mlig455_016811 Receptor family ligand binding region Details
16. MligTC455_09820 0.342 Mlig455_038000 Details

Similar genes by variation

Nr. Mlig455 TC Pearson corr. Mlig455 genes Homologs Pfam Full annotation
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