M. lignano Single Cells Juveniles
Mlig455
transcriptome Search Clusters Lineages Gates Plates Cells Download

MligTC455_46539 (RABGEF1)

Mlig455 TC Mlig455 genes Homologs Pfam Full annotation
MligTC455_46539 Mlig455_035832 RABGEF1; Rabex-5; Rabgef1 Vacuolar sorting protein 9 (VPS9) domain Mlig455_035832:
{TRANSSPLICED}
{Pfam: Vacuolar sorting protein 9 (VPS9) domain [PF02204.20, score=97.3]; A20-like zinc finger [PF01754.18, score=33.2]; Domain of unknown function (DUF5601) [PF18151.3, score=30.9]}
{Human: ENSG00000154710, RABGEF1, RAB guanine nucleotide exchange factor 1, [RH, Score=266, Expect=5e-83]}
{Mouse: ENSMUSG00000025340, Rabgef1, RAB guanine nucleotide exchange factor (GEF) 1, [RH, Score=270, Expect=6e-85]}
{Dmel: FBgn0262937, Rabex-5, Rabaptin-5-associated exchange factor for Rab5, [RH, Score=208, Expect=1e-59]}
{Celegans: WBGene00012644, rabx-5, RAB eXchange factor, [RH, Score=197, Expect=3e-57]}
{Smed: dd_Smed_v6_5901_0_1, dd_Smed_v6_5901_0_1, [RH, Score=238, Expect=8e-73]}

Links: Tomoseq.

Expression, Z-scaled

Variance, Z-scaled

Clusters

Expression, raw

Similar genes by expression

Nr. Mlig455 TC Pearson corr. Mlig455 genes Homologs Pfam Full annotation
1. MligTC455_40410 0.384 Mlig455_008565 Details
2. MligTC455_32648 0.363 Mlig455_010039
Mlig455_054061		 RNF216; Rnf216; ari-2 IBR domain, a half RING-finger domain Details
3. MligTC455_20858 0.36 Mlig455_045998 MME; Mme; Nep1 Peptidase family M13 Details
4. MligTC455_15941 0.36 Mlig455_049917 Replication factor A protein 3 Details
5. MligTC455_35919 0.355 Mlig455_025287 AAMDC; Aamdc Protein of unknown function (DUF498/DUF598) Details
6. MligTC455_36117 0.355 Mlig455_032713 DNApol-alpha180; POLA1; Pola1 DNA polymerase family B Details
7. MligTC455_51616 0.349 Mlig455_002489 GTF2E1; Gtf2e1; TfIIEalpha C-terminal general transcription factor TFIIE alpha Details
8. MligTC455_17201 0.348 Mlig455_018184
Mlig455_018188		 Details
9. MligTC455_33948 0.348 Mlig455_024063 Details
10. MligTC455_18185 0.348 Mlig455_044004 CG32944; STK32B; Stk32a Protein kinase domain Details
11. MligTC455_24263 0.348 Mlig455_046532
Mlig455_046640		 Details
12. MligTC455_15375 0.346 Mlig455_005170 EXOSC4; Exosc4; Ski6 3' exoribonuclease family, domain 1 Details
13. MligTC455_12536 0.341 Mlig455_044362 Details
14. MligTC455_12537 0.341 Mlig455_044373 Details
15. MligTC455_15573 0.336 Mlig455_016480
Mlig455_044297		 MORF4L1; MRG15; Morf4l1 MRG Details
16. MligTC455_44143 0.333 Mlig455_000462 GTF2H5; Gtf2h5; Tfb5 Transcription factor TFIIH complex subunit Tfb5 Details
17. MligTC455_48972 0.327 Mlig455_045091 Details
18. MligTC455_15347 0.327 Mlig455_013884
Mlig455_059961		 Details
19. MligTC455_44507 0.325 Mlig455_006707 Nuclear pore protein 84 / 107 Details
20. MligTC455_09909 0.325 Mlig455_013453 Details
21. MligTC455_38864 0.325 Mlig455_037911
Mlig455_038995		 GINS4; Gins4 DNA replication complex GINS protein SLD5 C-terminus Details
22. MligTC455_50149 0.325 Mlig455_027838
Mlig455_060011		 CG33966; TTPA; Ttpal CRAL/TRIO domain Details
23. MligTC455_18609 0.325 Mlig455_060050 CD2BP2; Cd2bp2; holn1 GYF domain Details
24. MligTC455_36465 0.325 Mlig455_065770
Mlig455_065793		 MYPT-75D; PPP1R16B; Ppp1r16a; Ppp1r16b Ankyrin repeats (3 copies) Details
25. MligTC455_19527 0.323 Mlig455_031533
Mlig455_056996		 Details
26. MligTC455_19152 0.322 Mlig455_059239 CSNK2B; CkIIbeta; Csnk2b Casein kinase II regulatory subunit Details
27. MligTC455_03418 0.322 Mlig455_071133 Thumpd2 Cysteine rich repeat Details
28. MligTC455_11126 0.32 Mlig455_024208 Details
29. MligTC455_16251 0.32 Mlig455_047256 GRIK1; Grik; Grik1 Ligand-gated ion channel Details
30. MligTC455_41583 0.318 Mlig455_029161 Details
31. MligTC455_25526 0.318 Mlig455_033027
Mlig455_044084		 TAF1; Taf1 Protein of unknown function (DUF3591) Details
32. MligTC455_42180 0.316 Mlig455_053626 HPS5; Hps5; p Details
33. MligTC455_25667 0.315 Mlig455_008175
Mlig455_008214		 FANCM; Fancm Helicase conserved C-terminal domain Details
34. MligTC455_51286 0.314 Mlig455_026596
Mlig455_042808		 ECT2; Ect2; pbl RhoGEF domain Details
35. MligTC455_36306 0.313 Mlig455_007247 Details
36. MligTC455_13485 0.313 Mlig455_019882 RNase H-like domain found in reverse transcriptase Details
37. MligTC455_26776 0.312 Mlig455_036700 Peptidase family C50 Details
38. MligTC455_24705 0.31 Mlig455_027557 RPS25; RpS25; Rps25 S25 ribosomal protein Details
39. MligTC455_18611 0.309 Mlig455_049493 CD2BP2; Cd2bp2; holn1 GYF domain Details
40. MligTC455_22927 0.307 Mlig455_002602 Details
41. MligTC455_47841 0.307 Mlig455_003792 Details
42. MligTC455_24872 0.307 Mlig455_003960 Details
43. MligTC455_03972 0.307 Mlig455_004909 Thumpd2 Details
44. MligTC455_20398 0.307 Mlig455_007006
Mlig455_007020		 Details
45. MligTC455_10336 0.307 Mlig455_007601 CG9003; FBXL20; Fbxl20 F-box-like Details
46. MligTC455_54604 0.307 Mlig455_007710 PRR9 Details
47. MligTC455_22901 0.307 Mlig455_009084 Details
48. MligTC455_12816 0.307 Mlig455_011135 HMCN1; Hmcn1; Sema5c Thrombospondin type 1 domain Details
49. MligTC455_55127 0.307 Mlig455_012554 PRR9 Details
50. MligTC455_16414 0.307 Mlig455_013104
Mlig455_013105
Mlig455_013196		 CG42265 Otopetrin Details
51. MligTC455_50975 0.307 Mlig455_014388 CHRNB3; Chrnb3; nAChRalpha1 Neurotransmitter-gated ion-channel ligand binding domain Details
52. MligTC455_49692 0.307 Mlig455_015152 CALM2; Calm3; Cam EF-hand domain pair Details
53. MligTC455_29358 0.307 Mlig455_017627 DUSP19; Dusp12; MKP-4 Dual specificity phosphatase, catalytic domain Details
54. MligTC455_33894 0.307 Mlig455_019045 MYPT-75D; TEX14; Tex14 Protein tyrosine and serine/threonine kinase Details
55. MligTC455_10156 0.307 Mlig455_019795 Details
56. MligTC455_12813 0.307 Mlig455_020833 Details
57. MligTC455_03588 0.307 Mlig455_021277 Domain of unknown function (DUF4081) Details
58. MligTC455_03057 0.307 Mlig455_022616 Lectin C-type domain Details
59. MligTC455_15198 0.307 Mlig455_022925 HTR1B; Htr1f; Octbeta3R 7 transmembrane receptor (rhodopsin family) Details
60. MligTC455_41057 0.307 Mlig455_022788
Mlig455_022966		 BAG1; Bag1 Ubiquitin-like domain Details
61. MligTC455_44150 0.307 Mlig455_025864
Mlig455_025926		 BRCT domain, a BRCA1 C-terminus domain Details
62. MligTC455_44151 0.307 Mlig455_025957 PCM1; Pcm1 Pericentriolar material 1 C terminus Details
63. MligTC455_15301 0.307 Mlig455_027118 ADAT3; Adat3; CG10927 Cytidine and deoxycytidylate deaminase zinc-binding region Details
64. MligTC455_16210 0.307 Mlig455_027851 Details
65. MligTC455_36970 0.307 Mlig455_028485
Mlig455_028511		 AC093830.1; ASIC5 Amiloride-sensitive sodium channel Details
66. MligTC455_23276 0.307 Mlig455_031010 PRR9 Details
67. MligTC455_53923 0.307 Mlig455_031505 GCS2alpha; MGAM; Mgam Glycosyl hydrolases family 31 Details
68. MligTC455_02871 0.307 Mlig455_032399 Details
69. MligTC455_23893 0.307 Mlig455_032717
Mlig455_032741		 RNF122; Rnf181; godzilla Ring finger domain Details
70. MligTC455_29576 0.307 Mlig455_033700 CNTN6; Nrcam; Nrg Immunoglobulin domain Details
71. MligTC455_19647 0.307 Mlig455_034716 CHRNA9; Chrna9; nAChRalpha2 Neurotransmitter-gated ion-channel ligand binding domain Details
72. MligTC455_21410 0.307 Mlig455_034916 DNAJA4; Dnaja4; Droj2 DnaJ domain Details
73. MligTC455_21704 0.307 Mlig455_036437 Details
74. MligTC455_34417 0.307 Mlig455_037242 Details
75. MligTC455_06515 0.307 Mlig455_037562 Details
76. MligTC455_13569 0.307 Mlig455_038424 Details
77. MligTC455_39448 0.307 Mlig455_038809 Details
78. MligTC455_06178 0.307 Mlig455_039406 PTEN; Pten C2 domain of PTEN tumour-suppressor protein Details
79. MligTC455_09720 0.307 Mlig455_039937 Details
80. MligTC455_02671 0.307 Mlig455_041936 BTB/POZ domain Details
81. MligTC455_08097 0.307 Mlig455_044169 Details
82. MligTC455_17672 0.307 Mlig455_044837 Details
83. MligTC455_39443 0.307 Mlig455_038781
Mlig455_038790
Mlig455_039908
Mlig455_047983		 Details
84. MligTC455_02787 0.307 Mlig455_050110 Domain of unknown function (DUF4081) Details
85. MligTC455_01924 0.307 Mlig455_054751 Details
86. MligTC455_02070 0.307 Mlig455_057684 Details
87. MligTC455_30940 0.307 Mlig455_058948 DUSP12; Dusp12; MKP-4 Dual specificity phosphatase, catalytic domain Details
88. MligTC455_07232 0.307 Mlig455_060828 Details
89. MligTC455_05128 0.307 Mlig455_060842 Domain of unknown function (DUF4081) Details
90. MligTC455_24107 0.307 Mlig455_060942 CG4080; MARCH8; March8 RING-variant domain Details
91. MligTC455_03058 0.307 Mlig455_063622 Lectin C-type domain Details
92. MligTC455_08108 0.307 Mlig455_065170
Mlig455_065172		 Details
93. MligTC455_19648 0.307 Mlig455_034667
Mlig455_067587		 CHRNA7; CHRNA9; Chrna7; Chrna9; nAChRalpha2 Neurotransmitter-gated ion-channel ligand binding domain Details
94. MligTC455_16124 0.307 Mlig455_012385
Mlig455_012807
Mlig455_071084		 Details
95. MligTC455_40597 0.306 Mlig455_029957 Details
96. MligTC455_44506 0.305 Mlig455_006657 NUP107; Nup107 Nuclear pore protein 84 / 107 Details
97. MligTC455_53632 0.304 Mlig455_041834 UCHL5; Uch-L5; Uchl5 Ubiquitin carboxyl-terminal hydrolase, family 1 Details
98. MligTC455_31776 0.303 Mlig455_043183 TRIM3; Trim3 NHL repeat Details
99. MligTC455_20857 0.302 Mlig455_013177 MME; Mme; Nep1 Peptidase family M13 Details
100. MligTC455_23015 0.302 Mlig455_044423 ACTR10; Actr10; Arp10 Actin Details
101. MligTC455_51890 0.301 Mlig455_057301 NVL; Nvl; smid ATPase family associated with various cellular activities (AAA) Details

Similar genes by variation

Nr. Mlig455 TC Pearson corr. Mlig455 genes Homologs Pfam Full annotation
Berezikov Lab - 2023 © ERIBA