MligTC455_43008 (Lgr5)
| Mlig455 TC | Mlig455 genes | Homologs | Pfam | Full annotation |
|---|---|---|---|---|
| MligTC455_43008 | Mlig455_033868 | Lgr5; RTN4R; lbk | Leucine rich repeat | Mlig455_033868: {Pfam: Leucine rich repeat [PF13855.8, score=137.8]; Leucine Rich repeats (2 copies) [PF12799.9, score=68.3]; BspA type Leucine rich repeat region (6 copies) [PF13306.8, score=61.0]; Leucine Rich Repeat [PF00560.35, score=32.7]; Leucine-rich repeat [PF14580.8, score=25.3]} {Human: ENSG00000040608, RTN4R, reticulon 4 receptor, [Score=93.6, Expect=3e-20]; ENSG00000099769, IGFALS, insulin like growth factor binding protein acid labile subunit, [Score=90.1, Expect=4e-19]} {Mouse: ENSMUSG00000020140, Lgr5, leucine rich repeat containing G protein coupled receptor 5, [Score=86.7, Expect=6e-18]; ENSMUSG00000046070, Igfals, insulin-like growth factor binding protein, acid labile subunit, [Score=86.3, Expect=7e-18]} {Dmel: FBgn0034083, lbk, lambik, [Score=79.3, Expect=1e-15]} {Celegans: WBGene00010621, egg-6, Leucine-rich repeat-containing protein egg-6, [Score=84.3, Expect=2e-17]} {Smed: dd_Smed_v6_19180_0_1, dd_Smed_v6_19180_0_1, [RH, Score=80.1, Expect=3e-16]} |
Links: Tomoseq.
Expression, Z-scaled
Variance, Z-scaled
Clusters
Expression, raw
Similar genes by expression
| Nr. | Mlig455 TC | Pearson corr. | Mlig455 genes | Homologs | Pfam | Full annotation |
|---|---|---|---|---|---|---|
| 1. | MligTC455_43007 | 0.912 | Mlig455_033852 | IGFALS; Igfals; Toll-7 | Leucine rich repeat | Details |
| 2. | MligTC455_33182 | 0.381 | Mlig455_051889 | Details | ||
| 3. | MligTC455_31946 | 0.337 | Mlig455_023377 Mlig455_046956 Mlig455_068953 |
CG6236 | Protein of unknown function (DUF229) | Details |
| 4. | MligTC455_13190 | 0.327 | Mlig455_000845 | Details | ||
| 5. | MligTC455_55219 | 0.327 | Mlig455_003898 | PAN domain | Details | |
| 6. | MligTC455_01983 | 0.327 | Mlig455_006220 | Details | ||
| 7. | MligTC455_31341 | 0.327 | Mlig455_008221 | PTPRC; Ptp52F; Ptprc | Protein-tyrosine phosphatase | Details |
| 8. | MligTC455_53263 | 0.327 | Mlig455_012814 | KREMEN1 | WSC domain | Details |
| 9. | MligTC455_14445 | 0.327 | Mlig455_017431 | Details | ||
| 10. | MligTC455_07854 | 0.327 | Mlig455_025830 | Details | ||
| 11. | MligTC455_14542 | 0.327 | Mlig455_038545 | CHRNA9; Chrna9; nAChRalpha5 | Neurotransmitter-gated ion-channel transmembrane region | Details |
| 12. | MligTC455_15048 | 0.327 | Mlig455_039478 | ANK1; Ank1; Ank2 | Ankyrin repeats (3 copies) | Details |
| 13. | MligTC455_13050 | 0.327 | Mlig455_042006 | Details | ||
| 14. | MligTC455_00750 | 0.327 | Mlig455_043324 | Details | ||
| 15. | MligTC455_01103 | 0.327 | Mlig455_044387 | CHRNA6; Chrna6; nAChRalpha2 | Neurotransmitter-gated ion-channel transmembrane region | Details |
| 16. | MligTC455_44580 | 0.327 | Mlig455_051475 | Amiloride-sensitive sodium channel | Details | |
| 17. | MligTC455_48323 | 0.327 | Mlig455_058002 | BB014433; Muc55B; ZAN | Details | |
| 18. | MligTC455_48324 | 0.327 | Mlig455_058196 | BB014433; Muc55B; ZAN | Details | |
| 19. | MligTC455_12688 | 0.327 | Mlig455_066704 | Details | ||
| 20. | MligTC455_15721 | 0.327 | Mlig455_067714 | TRPC3; Trpc3; Trpgamma | Transient receptor ion channel II | Details |
| 21. | MligTC455_44582 | 0.327 | Mlig455_067754 | Amiloride-sensitive sodium channel | Details | |
| 22. | MligTC455_31907 | 0.327 | Mlig455_068157 | AAMDC; Aamdc | Protein of unknown function (DUF498/DUF598) | Details |
| 23. | MligTC455_29925 | 0.321 | Mlig455_047752 | Details | ||
| 24. | MligTC455_48183 | 0.319 | Mlig455_042161 | SCN11A; Scn5a; para | Ion transport protein | Details |
| 25. | MligTC455_36768 | 0.315 | Mlig455_047617 Mlig455_047668 |
CASP3; Casp1; Decay | Caspase domain | Details |
| 26. | MligTC455_38890 | 0.313 | Mlig455_023830 Mlig455_038904 Mlig455_063874 Mlig455_063891 |
MEF2A; MEF2B; Mef2; Mef2a; Mef2c | SRF-type transcription factor (DNA-binding and dimerisation domain) | Details (TF) |
| 27. | MligTC455_45081 | 0.312 | Mlig455_018497 | CG13784; PQLC1; Pqlc1 | PQ loop repeat | Details |
| 28. | MligTC455_51808 | 0.308 | Mlig455_046295 | Details | ||
| 29. | MligTC455_21960 | 0.305 | Mlig455_005755 | Autophagy-related protein 27 | Details | |
| 30. | MligTC455_22778 | 0.301 | Mlig455_047337 | Details |
Similar genes by variation
| Nr. | Mlig455 TC | Pearson corr. | Mlig455 genes | Homologs | Pfam | Full annotation |
|---|
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