M. lignano Single Cells Juveniles
Mlig455
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MligTC455_51388 (RNF38)

Mlig455 TC Mlig455 genes Homologs Pfam Full annotation
MligTC455_51388 Mlig455_005090
Mlig455_005220		 RNF38; Rnf38; Rnf44; mura Ring finger domain Mlig455_005090:
{TRANSSPLICED}
{Pfam: Ring finger domain [PF13639.8, score=50.3]; RING-H2 zinc finger domain [PF12678.9, score=35.5]; RING-like zinc finger [PF17123.7, score=34.1]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=33.6]; zinc-RING finger domain [PF14634.8, score=29.9]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=27.9]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=21.7]; RING-type zinc-finger [PF13445.8, score=19.5]}
{Human: ENSG00000137075, RNF38, ring finger protein 38, [RH, Score=123, Expect=4e-29]; ENSG00000146083, RNF44, ring finger protein 44, [RH, Score=122, Expect=2e-29]}
{Mouse: ENSMUSG00000035696, Rnf38, ring finger protein 38, [RH, Score=122, Expect=3e-29]; ENSMUSG00000034928, Rnf44, ring finger protein 44, [RH, Score=122, Expect=5e-30]}
{Dmel: FBgn0037705, mura, murashka, [Score=119, Expect=1e-27]}
{Celegans: WBGene00023404, plr-1, Probable E3 ubiquitin-protein ligase plr-1, [RH, Score=72.0, Expect=4e-13]}
{Smed: dd_Smed_v6_2844_0_1, dd_Smed_v6_2844_0_1, [RH, Score=117, Expect=5e-29]}

Mlig455_005220:
{Pfam: Ring finger domain [PF13639.8, score=50.3]; RING-H2 zinc finger domain [PF12678.9, score=35.4]; RING-like zinc finger [PF17123.7, score=34.1]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=33.6]; zinc-RING finger domain [PF14634.8, score=29.9]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=27.9]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=21.7]; RING-type zinc-finger [PF13445.8, score=19.5]}
{Human: ENSG00000137075, RNF38, ring finger protein 38, [RH, Score=123, Expect=4e-29]; ENSG00000146083, RNF44, ring finger protein 44, [RH, Score=122, Expect=3e-29]}
{Mouse: ENSMUSG00000034928, Rnf44, ring finger protein 44, [RH, Score=122, Expect=5e-30]; ENSMUSG00000035696, Rnf38, ring finger protein 38, [RH, Score=122, Expect=3e-29]}
{Dmel: FBgn0037705, mura, murashka, [Score=119, Expect=1e-27]}
{Celegans: WBGene00023404, plr-1, Probable E3 ubiquitin-protein ligase plr-1, [RH, Score=72.0, Expect=5e-13]}
{Smed: dd_Smed_v6_2844_0_1, dd_Smed_v6_2844_0_1, [RH, Score=117, Expect=7e-29]}

Links: Tomoseq.

Expression, Z-scaled

Variance, Z-scaled

Clusters

Expression, raw

Similar genes by expression

Nr. Mlig455 TC Pearson corr. Mlig455 genes Homologs Pfam Full annotation
1. MligTC455_18147 0.394 Mlig455_048333 U2AF1L5; U2af1; U2af38 Zinc finger C-x8-C-x5-C-x3-H type (and similar) Details
2. MligTC455_18148 0.386 Mlig455_048309
Mlig455_048353		 U2AF1L5; U2af1; U2af38 Zinc finger C-x8-C-x5-C-x3-H type (and similar) Details
3. MligTC455_22822 0.35 Mlig455_004132
Mlig455_060459		 PSMB4; Prosbeta7; Psmb4 Proteasome subunit Details
4. MligTC455_26593 0.344 Mlig455_025683 API5; Aac11; Api5 Apoptosis inhibitory protein 5 (API5) Details
5. MligTC455_49776 0.341 Mlig455_022420 DDX49; Dbp45A; Ddx49 DEAD/DEAH box helicase Details
6. MligTC455_51454 0.339 Mlig455_007661 INTS9; IntS9; Ints9 Metallo-beta-lactamase superfamily domain Details
7. MligTC455_26798 0.337 Mlig455_002597 NAA15; Naa15; Naa15-16 NMDA receptor-regulated protein 1 Details
8. MligTC455_24955 0.329 Mlig455_000650 CG31702; RTF1; Rtf1 Plus-3 domain Details
9. MligTC455_51455 0.329 Mlig455_020896 INTS9; IntS9; Ints9 Metallo-beta-lactamase superfamily domain Details
10. MligTC455_23993 0.328 Mlig455_041103 ALKBH3; Alkbh3 2OG-Fe(II) oxygenase superfamily Details
11. MligTC455_44008 0.324 Mlig455_028358 PSMB6; Prosbeta1; Psmb6 Proteasome subunit Details
12. MligTC455_44506 0.322 Mlig455_006657 NUP107; Nup107 Nuclear pore protein 84 / 107 Details
13. MligTC455_46128 0.322 Mlig455_009070 Details
14. MligTC455_08804 0.322 Mlig455_022600 AKIRIN1; Akirin1; akirin Details
15. MligTC455_43799 0.321 Mlig455_019747 LSM7; LSm7; Lsm7 LSM domain Details
16. MligTC455_35925 0.321 Mlig455_023109 GINS3; Gins3; Psf3 Details
17. MligTC455_53140 0.319 Mlig455_057331 Details
18. MligTC455_34509 0.317 Mlig455_056679 SLBP; Slbp Histone RNA hairpin-binding protein RNA-binding domain Details
19. MligTC455_23455 0.317 Mlig455_070572 LRR1; Lrr47; Lrrc47 Leucine rich repeat Details
20. MligTC455_24916 0.316 Mlig455_004424 RPL7; RpL7; Rpl7 Ribosomal protein L30p/L7e Details
21. MligTC455_01433 0.316 Mlig455_005225 Details
22. MligTC455_44507 0.316 Mlig455_006707 Nuclear pore protein 84 / 107 Details
23. MligTC455_26011 0.313 Mlig455_049155 GTF2B; Gtf2b; TfIIB Transcription factor TFIIB repeat Details (TF)
24. MligTC455_50791 0.309 Mlig455_049295 Details
25. MligTC455_39639 0.308 Mlig455_025048 COX5B; Cox5b Cytochrome c oxidase subunit Vb Details
26. MligTC455_41188 0.307 Mlig455_049658
Mlig455_049684		 Details
27. MligTC455_22823 0.307 Mlig455_060501 PSMB4; Prosbeta7; Psmb4 Proteasome subunit Details
28. MligTC455_26012 0.306 Mlig455_049208 GTF2B; Gtf2b; TfIIB Transcription factor TFIIB repeat Details (TF)
29. MligTC455_43592 0.304 Mlig455_015053 CDK1; Cdk1 Protein kinase domain Details
30. MligTC455_33465 0.304 Mlig455_015592 ATP6V0A4; Atp6v0a1; Vha100-2 V-type ATPase 116kDa subunit family Details
31. MligTC455_39361 0.304 Mlig455_041392
Mlig455_069358		 Details
32. MligTC455_24915 0.303 Mlig455_004421
Mlig455_037262		 RPL7; RpL7; Rpl7 Ribosomal protein L30p/L7e Details
33. MligTC455_40885 0.302 Mlig455_023980 EIF4H; Eif4h; eIF4H2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Details
34. MligTC455_29499 0.301 Mlig455_010071 RNPS1; RnpS1; Rnps1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Details
35. MligTC455_21822 0.301 Mlig455_013947 Details
36. MligTC455_24277 0.301 Mlig455_014215 Details
37. MligTC455_40949 0.301 Mlig455_015679 PSMC2; Psmc2; Rpt1 ATPase family associated with various cellular activities (AAA) Details
38. MligTC455_21843 0.301 Mlig455_020925 RPL27A; RpL27A; Rpl27a Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A Details
39. MligTC455_09165 0.301 Mlig455_026766 CaMKII; Camk1g; DAPK3 Protein kinase domain Details
40. MligTC455_41147 0.301 Mlig455_031647 HNRNPL; Hnrnpl; sm RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Details
41. MligTC455_30780 0.301 Mlig455_033760 ALG13; Otud4 Details
42. MligTC455_55556 0.301 Mlig455_036213 Pentapeptide repeats (9 copies) Details
43. MligTC455_41323 0.301 Mlig455_036740 Details
44. MligTC455_41167 0.301 Mlig455_040967 NCAN; Ncan Lectin C-type domain Details
45. MligTC455_52058 0.301 Mlig455_041271 Details
46. MligTC455_44481 0.301 Mlig455_050911 Details
47. MligTC455_27630 0.301 Mlig455_055798 Pao retrotransposon peptidase Details
48. MligTC455_10587 0.301 Mlig455_040759
Mlig455_064593
Mlig455_066780		 Details

Similar genes by variation

Nr. Mlig455 TC Pearson corr. Mlig455 genes Homologs Pfam Full annotation
1. MligTC455_33305 0.388 Mlig455_045116 H3F3A; H3f3a; His3.3B Core histone H2A/H2B/H3/H4 Details
2. MligTC455_43677 0.375 Mlig455_038801
Mlig455_038817		 CCT5; Cct5 TCP-1/cpn60 chaperonin family Details
3. MligTC455_38395 0.374 Mlig455_004947 RPSA; Rpsa; sta Ribosomal protein S2 Details
4. MligTC455_41196 0.367 Mlig455_069276 MRPS16; Mrps16; mRpS16 Ribosomal protein S16 Details
5. MligTC455_41495 0.366 Mlig455_029522 ERH; Erh; e(r) Enhancer of rudimentary Details
6. MligTC455_51042 0.366 Mlig455_024763
Mlig455_068658		 RBM38; Rbm24; Rbp6 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Details
7. MligTC455_35607 0.365 Mlig455_039150 RPS14; RpS14a; Rps14 Ribosomal protein S11 Details
8. MligTC455_37742 0.364 Mlig455_024881
Mlig455_068446
Mlig455_068447		 CNOT6; Cnot6l; twin Endonuclease/Exonuclease/phosphatase family Details
9. MligTC455_29687 0.362 Mlig455_041331 B52; SRSF4; Srsf4 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Details
10. MligTC455_19399 0.361 Mlig455_069013 CG15019; LLPH; Llph Learning-associated protein Details
11. MligTC455_33900 0.36 Mlig455_049636
Mlig455_054614		 Mpcp1; SLC25A3; Slc25a3 Mitochondrial carrier protein Details
12. MligTC455_28276 0.358 Mlig455_030901 MYH10; Myh10; zip Myosin head (motor domain) Details
13. MligTC455_25504 0.356 Mlig455_010550 RPS23; RpS23; Rps23 Ribosomal protein S12/S23 Details
14. MligTC455_50768 0.352 Mlig455_021547 Details
15. MligTC455_29031 0.351 Mlig455_007131 A2M; Cd109; Mcr A-macroglobulin TED domain Details
16. MligTC455_51520 0.348 Mlig455_029218
Mlig455_035626		 CREBBP; Crebbp; nej Histone acetylation protein Details
17. MligTC455_34959 0.345 Mlig455_049402 RPS11; RpS11; Rps11 Ribosomal protein S17 Details
18. MligTC455_53929 0.344 Mlig455_007924
Mlig455_008062		 RPL24; RpL24; Rpl24 Ribosomal protein L24e Details
19. MligTC455_50952 0.344 Mlig455_010093 SSR2; Ssr2 Translocon-associated protein beta (TRAPB) Details
20. MligTC455_46928 0.343 Mlig455_048845 CG3702; CLPTM1; Clptm1 Cleft lip and palate transmembrane protein 1 (CLPTM1) Details
21. MligTC455_53547 0.343 Mlig455_053254 CG13096; Rsl1d1 Ribosomal protein L1p/L10e family Details
22. MligTC455_03692 0.342 Mlig455_010735 EPB41L3; Epb41l3; cora SPRY domain Details
23. MligTC455_41997 0.342 Mlig455_025817 SNRPD3; SmD3; Snrpd3 LSM domain Details
24. MligTC455_28880 0.339 Mlig455_007223
Mlig455_007458		 DNA polymerase type B, organellar and viral Details
25. MligTC455_30145 0.337 Mlig455_020349 CNBP; Cnbp Zinc knuckle Details
26. MligTC455_52576 0.337 Mlig455_033217 RPL6; RpL6; Rpl6 Ribosomal protein L6e Details
27. MligTC455_48973 0.336 Mlig455_008868
Mlig455_008967		 CBX5; Cbx5; HP1b Chromo shadow domain Details
28. MligTC455_23303 0.335 Mlig455_001441 SUB1; Ssb-c31a; Sub1 Transcriptional Coactivator p15 (PC4) Details
29. MligTC455_47138 0.335 Mlig455_020563 HSPA5; Hsc70-3; Hspa5 Hsp70 protein Details
30. MligTC455_21711 0.331 Mlig455_046285 SERBP1; Serbp1; vig2 Hyaluronan / mRNA binding family Details
31. MligTC455_27605 0.33 Mlig455_011159 RPS27A; RpS27A; Rps27a Ubiquitin family Details
32. MligTC455_53848 0.33 Mlig455_043899 H1f0; His1:CG33825 linker histone H1 and H5 family Details
33. MligTC455_50622 0.33 Mlig455_053962
Mlig455_054032		 VMA21; Vma21 VMA21-like domain Details
34. MligTC455_21712 0.329 Mlig455_061536 SERBP1; Serbp1; vig2 Hyaluronan / mRNA binding family Details
35. MligTC455_35299 0.329 Mlig455_062248 LLGL2; Llgl2; l(2)gl LLGL2 Details
36. MligTC455_26798 0.327 Mlig455_002597 NAA15; Naa15; Naa15-16 NMDA receptor-regulated protein 1 Details
37. MligTC455_34651 0.327 Mlig455_035703
Mlig455_035710
Mlig455_035796		 CHL1; Chl1 Bravo-like intracellular region Details
38. MligTC455_43637 0.327 Mlig455_044487 BCAP31; Bcap31; CG13887 Bap31/Bap29 transmembrane region Details
39. 0.327 Details
40. MligTC455_23181 0.326 Mlig455_018969 RPS18; RpS18; Rps18 Ribosomal protein S13/S18 Details
41. MligTC455_28886 0.326 Mlig455_007371
Mlig455_017980
Mlig455_051928
Mlig455_058107		 DNA polymerase type B, organellar and viral Details
42. MligTC455_44198 0.326 Mlig455_067002 ND-PDSW; NDUFB10; Ndufb10 NADH-ubiquinone oxidoreductase subunit 10 Details
43. MligTC455_44401 0.325 Mlig455_001906
Mlig455_048804		 ATP6V1C1; Atp6v1c1; Vha44 V-ATPase subunit C Details
44. MligTC455_27616 0.325 Mlig455_049267 RPS27A; RpS27A; Rps27a Ubiquitin family Details
45. MligTC455_41720 0.325 Mlig455_059515 GstS1; Gstp1; HPGDS Glutathione S-transferase, C-terminal domain Details
46. MligTC455_17163 0.324 Mlig455_003979 RPL6; RpL6; Rpl6 Ribosomal protein L6e Details
47. MligTC455_53066 0.324 Mlig455_020061
Mlig455_040860
Mlig455_066485		 PFDN5; Pfdn5 Prefoldin subunit Details
48. MligTC455_25275 0.324 Mlig455_019917
Mlig455_047956		 TNK2; Tnk2 Details
49. MligTC455_33667 0.324 Mlig455_007432
Mlig455_009113
Mlig455_018420
Mlig455_018422
Mlig455_019321
Mlig455_019779
Mlig455_022265
Mlig455_030138
Mlig455_039042
Mlig455_044740
Mlig455_046763
Mlig455_048838
Mlig455_070035		 Details
50. MligTC455_31449 0.323 Mlig455_008143
Mlig455_039731
Mlig455_070534		 Cytoplasmic repetitive antigen (CRA) like repeat;
Essential protein Yae1, N terminal		 Details
51. MligTC455_33322 0.321 Mlig455_058828 RPS15A; RpS15Aa; Rps15a Ribosomal protein S8 Details
52. MligTC455_48640 0.32 Mlig455_058009 Details
53. MligTC455_30081 0.319 Mlig455_026139
Mlig455_043119		 Details
54. MligTC455_25096 0.319 Mlig455_006239
Mlig455_054228		 HNRNPA2B1; Hnrnpa2b1; Hrb87F; Rbp4 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Details
55. MligTC455_21035 0.319 Mlig455_056024 RPS29; RpS29; Rps29 Ribosomal protein S14p/S29e Details
56. MligTC455_36313 0.318 Mlig455_001189
Mlig455_001345		 Gm3550; RPL29; RpL29 Ribosomal L29e protein family Details
57. MligTC455_29346 0.317 Mlig455_007074
Mlig455_007076
Mlig455_014824		 Mcr A-macroglobulin TED domain;
Peptidase family M13		 Details
58. MligTC455_29626 0.317 Mlig455_041134 DAZAP1; Dazap1; Hrb27C RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Details
59. MligTC455_32803 0.317 Mlig455_049692 RPL36A; RpL36A; Rpl36a Ribosomal protein L44 Details
60. MligTC455_30080 0.316 Mlig455_004497 Details
61. MligTC455_27400 0.316 Mlig455_049098 RPL38; RpL38; Rpl38 Ribosomal L38e protein family Details
62. MligTC455_22826 0.315 Mlig455_006871 ATG4C; Atg4b; Atg4c Peptidase family C54 Details
63. MligTC455_24530 0.315 Mlig455_035417 CG12479; MINOS1; Minos1 Domain of unknown function (DUF543) Details
64. MligTC455_39359 0.315 Mlig455_043733
Mlig455_043824		 HEATR1; Heatr1 U3 small nucleolar RNA-associated protein 10 Details
65. MligTC455_51043 0.315 Mlig455_058319 RBM38; Rbm24; Rbp6 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Details
66. MligTC455_26343 0.314 Mlig455_038206
Mlig455_038280
Mlig455_042547		 CG3822; FK506-bp2; FKBP1B; Fkbp1b; GRID1; Grid1 FKBP-type peptidyl-prolyl cis-trans isomerase;
Ligand-gated ion channel		 Details
67. MligTC455_32800 0.314 Mlig455_061716
Mlig455_061747		 HSD17B10; Hsd17b10; scu short chain dehydrogenase Details
68. MligTC455_24071 0.313 Mlig455_016654 Details
69. MligTC455_24072 0.313 Mlig455_016722 Details
70. MligTC455_29457 0.313 Mlig455_052418 RPLP0; RpLP0; Rplp0 60s Acidic ribosomal protein Details
71. MligTC455_30486 0.313 Mlig455_003470
Mlig455_058148		 CG4049; RAD54L2; Rad54l2 SNF2-related domain Details
72. MligTC455_48705 0.312 Mlig455_023100
Mlig455_027772		 CALU; Calu; scf EF hand Details
73. MligTC455_48802 0.311 Mlig455_032960
Mlig455_041857		 Rox8; TIA1; Tia1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Details
74. MligTC455_23966 0.311 Mlig455_050614
Mlig455_060959		 RPL14; RpL14; Rpl14 Ribosomal protein L14 Details
75. MligTC455_29579 0.31 Mlig455_063430
Mlig455_066644		 SGTA; Sgt; Sgta Tetratricopeptide repeat Details
76. MligTC455_44199 0.309 Mlig455_023582
Mlig455_050170		 ND-PDSW; NDUFB10; Ndufb10 NADH-ubiquinone oxidoreductase subunit 10 Details
77. MligTC455_46623 0.309 Mlig455_064923
Mlig455_064954		 UBE2D2; Ube2d2a; eff Ubiquitin-conjugating enzyme Details
78. MligTC455_17822 0.309 Mlig455_065131 RPS27L; RpS27; Rps27l Ribosomal protein S27 Details
79. MligTC455_21846 0.308 Mlig455_029635 RPL27A; RpL27A; Rpl27a Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A Details
80. MligTC455_35115 0.308 Mlig455_030023 B52; SRSF4; Srsf4 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Details
81. MligTC455_27421 0.308 Mlig455_031124 Kxd1; RpL40; UBA52 Ubiquitin family Details
82. MligTC455_39790 0.308 Mlig455_054533
Mlig455_055385
Mlig455_055459		 Gm2000; RPL35; RpL35 Ribosomal L29 protein Details
83. MligTC455_53996 0.308 Mlig455_059326 Mal-B1; SLC3A1; Slc3a1 Solute carrier family 3 member 2 N-terminus Details
84. MligTC455_41860 0.308 Mlig455_015322
Mlig455_015364
Mlig455_068750		 CG7483; EIF4A3; Eif4a3 DEAD/DEAH box helicase Details
85. MligTC455_30213 0.307 Mlig455_010339 Gm10320; SEC61B; Sec61beta Sec61beta family Details
86. MligTC455_27697 0.307 Mlig455_012396 ACTB; Act5C; Actb Actin Details
87. MligTC455_37474 0.307 Mlig455_068208 CG11360; MEX3D; Mex3d KH domain Details
88. MligTC455_50951 0.306 Mlig455_010086 SSR2; Ssr2 Translocon-associated protein beta (TRAPB) Details
89. MligTC455_41387 0.305 Mlig455_010629
Mlig455_010719		 RACK1; Rack1 WD domain, G-beta repeat Details
90. MligTC455_41978 0.305 Mlig455_058463 SRSF7; Srsf7; x16 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Details
91. MligTC455_25336 0.304 Mlig455_016656
Mlig455_016723		 Details
92. MligTC455_21843 0.304 Mlig455_020925 RPL27A; RpL27A; Rpl27a Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A Details
93. MligTC455_26964 0.304 Mlig455_042220 P4HB; P4hb; Pdi Thioredoxin-like domain Details
94. MligTC455_32486 0.304 Mlig455_043021 RPS13; RpS13; Rps13 Ribosomal S13/S15 N-terminal domain Details
95. MligTC455_51592 0.303 Mlig455_051202 HSPA9; Hsc70-5; Hspa9 Hsp70 protein Details
96. MligTC455_29455 0.302 Mlig455_012317 RPLP0; RpLP0; Rplp0 60s Acidic ribosomal protein Details
97. MligTC455_20884 0.302 Mlig455_031083 RPS2; RpS2; Rps2 Ribosomal protein S5, C-terminal domain Details
98. MligTC455_06405 0.302 Mlig455_044848
Mlig455_044940		 Cytochrome c oxidase subunit VIIc Details
99. MligTC455_52920 0.302 Mlig455_006314
Mlig455_033804
Mlig455_039341
Mlig455_043187
Mlig455_054935
Mlig455_060140		 Wdr41 Details
100. 0.302 Details
101. MligTC455_29625 0.301 Mlig455_041031 DAZAP1; Dazap1; Hrb27C RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Details
102. MligTC455_33829 0.301 Mlig455_008145
Mlig455_055291		 CEP135; Cep135 Crescentin protein Details
103. MligTC455_25506 0.301 Mlig455_061821 RPS23; RpS23; Rps23 Ribosomal protein S12/S23 Details
104. MligTC455_33575 0.3 Mlig455_030733 RPL18; RpL18; Rpl18 Ribosomal protein 60S L18 and 50S L18e Details
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